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  1. University of Arkansas for Medical Sciences
  2. College of Medicine
  3. Department of Biochemistry and Molecular Biology
  4. Department News
  5. Page 23

Department News

Alan Diekman receives Master Teacher Award from the College of Medicine

Alan Diekman, Ph.D., was honored as the 2020 Master Teacher in recognition of his work with first-year medical students. When College of Medicine students are asked about their best teachers, Diekman’s name comes up often. As director of the Molecules to Cells course, Diekman teaches first-year students and works with other faculty to ensure the students gain a firm grasp of biochemistry, cell biology and genetics – including complex concepts that many medical students nationwide struggle to grasp.

“Most importantly, he has convinced students that understanding molecular and cellular mechanisms is an important part of their medical training,” Department of Physiology and Biophysics Chair Michael Jennings, Ph.D., wrote in a letter of support for Diekman, who has served on the faculty since 2002.

“The word ‘outstanding’ may underestimate the quality of Dr. Diekman’s teaching effort, ability and outcomes,” Biochemistry and Molecular Biology Chair Kevin Raney, Ph.D., wrote in his nomination letter. “He is a superb communicator who treats students respectfully, while maintaining high expectations. Dr. Diekman also sets high standards for his colleagues, thereby improving the quality of teaching of those around him.”

James Graham, M.D., executive associate dean for academic affairs in the college, also wrote in support, noting strong performance by UAMS students in areas of the notoriously difficult United States Medical Licensing Exam Step 1 that are covered in Diekman’s course, as well as improved overall performance on the exam in recent years. Diekman has been instrumental in major curriculum revisions that change how first- and second-year medical students prepare for their clinically focused training.

“I am very honored by this recognition from my colleagues, and I thank them for their past support,” said Diekman. “The privilege of educating our medical students in the complex disciplines of biochemistry, cell biology and genetics is both challenging and fulfilling. My goal is to provide our students with a firm foundation in these disciplines, not just for their sake, but also for that of their future patients.”

Filed Under: Department News

May publications

Byrd lab

Genome Maintenance by DNA Helicase B.

Hazeslip L, Zafar MK, Chauhan MZ, Byrd AK.

Genes (Basel). 2020

 

 

Eugene Nyamugenda

Selective Survival of Sim1/MC4R Neurons in Diet-Induced Obesity.

Nyamugenda E, Griffin H, Russell S, Cooney KA, Kowalczyk NS, Islam I, Phelan KD, Baldini G.

iScience. 2020

 

 

 

 

Miller lab

Dual mechanisms suppress meloxicam bioactivation relative to sudoxicam.

Barnette DA, Schleiff MA, Osborn LR, Flynn N, Matlock M, Swamidass SJ, Miller GP.

Toxicology. 2020

 

 

 

 

Allie SchleiffAdvances in the study of drug metabolism – symposium report of the 12th Meeting of the International Society for the Study of Xenobiotics (ISSX).

Russell LE, Schleiff MA, Gonzalez E, Bart AG, Broccatelli F, Hartman JH, Humphreys WG, Lauschke VM, Martin I, Nwabufo C, Prasad B, Scott EE, Segall M, Takahashi R, Taub ME, Sodhi JK.
Drug Metab Rev. 2020

Filed Under: Department News

2020 Graduates

Tresor MukizaEugene NyamugendaBradley Shields

The UAMS Graduate School held a virtual hooding ceremony which you can read more about here. The Biochemistry and Molecular Biology Department graduated three students last year. Tresor Mukiza, Ph.D. is now a postdoctoral fellow in Joseph Opferman’s lab at St. Jude Children’s Research Hospital. Tresor’s mentor at UAMS was Wayne Wahls. Eugene Nyamugenda, Ph.D. is now a postdoctoral fellow in Ravi Allada’s lab at Northwestern University in the Department of Neurobiology. Eugene’s mentor at UAMS was Giulia Baldini. Bradley Shields, M.D., Ph.D. is beginning a residence in dermatology at Intermountain Medical Center and the University of Pittsburgh Medical Center. Bradley’s mentor at UAMS was Alan Tackett.

Filed Under: Department News

Recognize this researcher?

Alan Tackett, a professor in the Department of Biochemistry and Molecular Biology, was featured in a story on KARK this morning about clinical trials at UAMS.

Filed Under: Department News

Cancer Institute Member Spotlight — Samuel Mackintosh, Ph.D.

Assistant Professor
Department of Biochemistry and Molecular Biology
UAMS College of Medicine
Co-Director, Winthrop P. Rockefeller Cancer Institute Proteomics Shared Resource and UAMS Proteomics Core Facility

Research Interest Statement

My research interests are focused on proteomics and mass spectrometry. As co-director of the Proteomics Shared Resource and UAMS Proteomics Core Facility, I am involved in a wide variety of basic and translational research projects and collaborations at any given time. The core facility maintains and operates five state-of-the-art mass spectrometers, two of which I secured for the facility with NIH shared instrument grants. The core lab offers cutting-edge, affordable proteomics analysis to all UAMS investigators and Cancer Institute members. Our facility is nationally recognized with users in 35 states and Puerto Rico, and our research is routinely published in high-impact, peer-reviewed journals. We work closely with other researchers to help them design proteomics experiments, apply for grants and publish papers. We offer complete sample processing services so that our collaborators can submit samples they can easily prepare in their own labs. We also work closely with the UAMS Bioinformatics Core to prepare data for our collaborators in publication-ready formats.

Dr. Mackintosh’s Cancer–related Grants

NIH/NIGMS: 1S10OD026736

Samuel Mackintosh: Project PI

Title “Q Exactive HF-X Hybrid Quadrupole Orbitrap Mass Spectrometer”

08/01/2019 to 07/31/2020

$763,961*

*project direct cost

As part of Dr. Mackintosh’s role as co-director of the Winthrop P. Rockefeller Cancer Institute Proteomics Shared Resource and UAMS Proteomics Core Facility, he also serves as Co-I on the ACRI/UAMS COBRE grant (Center for Translational Pediatric Research, PI: Alan Tackett PhD., NIH award P20GM121293) and the UAMS INBRE grant (Partnerships for Biomedical Research in Arkansas, PI: Larry Cornett PhD., NIH award P20GM103429).

Dr. Mackintosh’s UAMS Collaborators

  • College of Medicine
    • Department of Internal Medicine
      • John Arthur, M.D., Ph.D.
      • Jawahar Mehta, M.D., Ph.D.
    • Department of Geriatrics
      • Srinivas Ayyadevara, Ph.D.
      • Richard Dennis, Ph.D.
      • Robert Reis, Ph.D.
    • Department of Biochemistry and Molecular Biology
      • Giulia Baldini, Ph.D.
      • Marie Burdine, Ph.D.
      • Alicia Byrd, Ph.D.
      • Stephanie Byrum, Ph.D.
      • Tim Chambers, Ph.D.
      • Rick Edmondson, Ph.D.
      • Robert Eoff, Ph.D.
      • Samantha Kendrick, Ph.D.
      • Grover Miller, Ph.D.
      • Kevin Raney, Ph.D.
      • Aaron Storey, Ph.D.
      • Alan Tackett, Ph.D.
      • Wayne Wahls, Ph.D.
      • Boris Zybaylov, Ph.D.
    • Department of Neurobiology and Developmental Sciences
      • Edgar Garcia-Rill, Ph.D.
      • Angus MacNicol, Ph.D.
    • Department of Biochemistry and Molecular Biology
      • Renny Lan, Ph.D.
    • Department of Pathology
      • Mayumi Nakagawa, M.D., Ph.D.
      • Steven Post, Ph.D.
    • Department of Physiology and Biophysics
      • Roy Morello, Ph.D.
    • Department of Microbiology and Immunology
      • Mark Smeltzer, Ph.D.
  • College of Pharmacy
    • Department of Pharmaceutical Sciences
      • Martin Hauer-Jensen, M.D., Ph.D.
  • College of Public Health
    • Department of Environmental and Occupational Health
      • Mitch McGill, Ph.D.
      • Gunnar Boysen, Ph.D.

Dr. Mackintosh’s External Collaborators

  • Randy Haun, Ph.D., Arkana Laboratories
  • Jeffrey Lewis, Ph.D., UA-Fayetteville
  • Arthur Salomon, Ph.D., Brown University
  • Sean Taverna, Ph.D., Johns Hopkins University
  • Greg Wang, Ph.D., University of North Carolina
  • Michael Wang, M.D., MD Anderson Cancer Center
  • Michael Washburn, Ph.D., Stowers Institute for Medical Research
  • Andrew Xiao, Ph.D., Yale University
  • Qin Yan, Ph.D., Yale University
  • Daohong Zhou, M.D., University of Florida

Opportunities for Collaboration

The resources of the Proteomics Core are available to anyone at UAMS, and there are pilot funding opportunities available for Cancer Institute members.

Filed Under: Department News

Genetics Society of America showcases article from Davidson and Wahls labs

Each year the editors of GSA journals select for distinction some of the year’s top scientific publications.  Congratulations to Aaron Storey, Hsin-Ping Wang, Reine Protacio, Mari Davidson and Wayne Wahls.  Their research article on Targeted Forward Genetics was featured in the GSA’s annual Spotlight:  A showcase of research and scholarship in selected articles from 2019. The work was supported by a research project grant (GM081766) from the National Institute of General Medical Sciences to Wayne Wahls.

Wahls lab

Mari Davidson, Wesley Wahls, Reine Protacio, Wayne Wahls, Tresor Mukiza, Aaron Storey, Melissa Sorsby, Hsin-Ping Wang

GENETICS SOCIETY OF AMERICA EDITORS’ NOTE  Storey et al. describe a powerful methodology for precisely-targeted, saturating mutational analyses of discrete chromosomal elements in situ.  In this method, more than 100,000 independent allele replacements, distributed over long regions of the target locus, can be generated simultaneously in each experiment.  The approach efficiently generates and identifies functionally-null and hypomorphic mutations throughout the targeted region.  This process of population-scale, targeted forward genetics over large distances allows scientists to rapidly dissect the structure and function of specific chromosomal elements and their encoded factors under native, biologically relevant conditions.

spotlight

Filed Under: Department News

The Mask Brigade

From Dean Westfall’s Accolades – May 6, 2020

As face masks have become the norm on campus and beyond, it’s important to remember the faces behind the masks – the colleagues, friends and strangers whose days and circumstances may be more difficult than we know. It turns out there is something else behind many of these masks: a story of generosity.

Dr. Kevin Raney, Professor and Chair of Biochemistry and Molecular Biology, was surprised and grateful when Dr. Tung-chin Chiang, an Assistant Professor in the College of Public Health and research collaborator with Dr. Alan Tackett, dropped off fabric masks for everyone in his department.

Dr. Raney learned that Dr. Chiang and her family have donated thousands of masks worldwide – including over 1,000 at UAMS alone. Dr. Chiang and her husband, COPH Professor Dr. Joseph Su, have put in countless hours to the project at UAMS. Dr. Chiang and her sister Jenny, with help from other sisters in Taiwan, designed their masks and coordinated production and shipment to places with limited immediate access to masks. Their efforts are dedicated to their late father, Fong-chan Chiang, and in the hope of having an impact on reducing the spread of COVID-19.

“We hope everyone can wear masks together to bring down the curve worldwide!” Dr. Chiang wrote to Dr. Raney.

Perhaps you have received one of these masks – or one of many thousands of others that have been made or contributed by generous, resourceful and creative members of Team UAMS and the community. There are countless good folks on our Mask Brigade, and we are grateful for them all.

Dr. Chiang has a great idea for anyone who wants to give thanks for those contributing masks: Make a contribution of time or money to the UAMS Stocked and Reddie Food Pantry. I applaud this idea and encourage you to consider it.

Filed Under: Department News

TRI Names 2020 KL2 Awardees

The UAMS Translational Research Institute has selected three early-career UAMS researchers to receive KL2 Mentored Research Career Development Awards.

The KL2 program provides two years of research training to junior faculty. It provides 75 percent salary support and up to $25,000 per year for research, tuition, travel and education.

The awardees are:

Britni Ayers, Ph.D., assistant professor, College of Medicine, UAMS Northwest Regional Campus; “Exploring the Feasibility of a Group Prenatal Program, Kōmmour Prenatal, to Reduce Maternal and Infant Health Disparities among Marshallese Pacific Islander Women.”

Jure Baloh, Ph.D., M.H.A., assistant professor, Health Policy and Management, College of Public Health; “Adapting a Supervision Strategy for Sustaining Fidelity to Evidence-Based Practices in Substance Use Disorder Treatment Settings.”

Kimberly StephensKimberly Stephens, Ph.D., M.P.H., assistant professor, Arkansas Children’s Research Institute (ACRI) Division/Center for Applied Research and Evaluation, Departments of Pediatrics and Biochemistry and Molecular Biology, College of Medicine; “Changes in Epigenetic Mechanisms and Symptom Clusters Associated with the Resolution of Persistent Pain following Spinal Cord Stimulation.”

The awardees were selected by a UAMS study section.

Filed Under: Department News

April publications

AuthorsProteoViz: a tool for the analysis and interactive visualization of phosphoproteomics data.

Storey AJ, Naceanceno KS, Lan RS, Washam CL, Orr LM, Mackintosh SG, Tackett AJ, Edmondson RD, Wang Z, Li HY, Frett B, Kendrick S, Byrum SD.

Mol Omics.

 

Giulia Baldini, M.D., Ph.D.Elevation of the unfolded protein response increases RANKL expression.

Iyer S, Melendez-Suchi C, Han L, Baldini G, Almeida M, Jilka RL.

FASEB Bioadv.

Filed Under: Department News

March publications

Eugene N and Marcus TrentzschDelivery of phosphatidylethanolamine blunts stress in hepatoma cells exposed to elevated palmitate by targeting the endoplasmic reticulum.

Trentzsch M, Nyamugenda E, Miles TK, Griffin H, Russell S, Koss B, Cooney KA, Phelan KD, Tackett AJ, Iyer S, Boysen G, Baldini G.

Cell Death Discov. 2020

 

Members of the Raney labMitochondrial genetic variation is enriched in G-quadruplex regions that stall DNA synthesis in vitro.

Butler TJ, Estep KN, Sommers JA, Maul RW, Moore AZ, Bandinelli S, Cucca F, Tuke MA, Wood AR, Bharti SK, Bogenhagen DF, Yakubovskaya E, Garcia-Diaz M, Guilliam TA, Byrd AK, Raney KD, Doherty AJ, Ferrucci L, Schlessinger D, Ding J, Brosh RM.

Hum Mol Genet.

Tackett lab

Utility of histone H3K27me3 and H4K20me as diagnostic indicators of melanoma.

Davis LE, Shalin SC, Tackett AJ.

Melanoma Res.

 

 

 

Members of the Chambers labCarbamate derivatives of colchicine show potent activity towards primary acute lymphoblastic leukemia and primary breast cancer cells-in vitro and ex vivo study.

Urbaniak A, Jousheghany F, Piña-Oviedo S, Yuan Y, Majcher-Uchańska U, Klejborowska G, Moorjani A, Monzavi-Karbassi B, Huczyński A, Chambers TC.

J Biochem Mol Toxicol.

 

Isabelle Racine Miousse, Ph.D.

Sex-Specific Effects of Dietary Methionine Restriction on the Intestinal Microbiome.

Wallis KF, Melnyk SB, Miousse IR.

Nutrients.

 

Filed Under: Department News

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