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  1. University of Arkansas for Medical Sciences
  2. College of Medicine
  3. Department of Biomedical Informatics
  4. Publications
  5. Page 7

Publications

Integrated omics analyses reveal the details of metabolic adaptation of Clostridium thermocellum to lignocellulose-derived growth inhibitors released during the deconstruction of switchgrass

Biotechnology for Biofuels | 2017 | DOI: https://doi.org/10.1186/s13068-016-0697-5 Suresh Poudel, Richard J. Giannone, Miguel Rodriguez Jr., Babu Raman, Madhavi Z. Martin, Nancy L. Engle, Jonathan R. Mielenz, Intawat Nookaew, Steven D. Brown, Timothy J. Tschaplinski, David Ussery, Robert L. Hettich Abstract Clostridium thermocellum is capable of solubilizing and converting lignocellulosic biomass into ethanol. Although much of the work-to-date has […]

Filed Under: Publications Tagged With: Babu Raman, David Ussery, Intawat Nookaew, Jonathan R. Mielenz, Madhavi Z. Martin, Miguel Rodriguez Jr., Nancy L. Engle, Richard J. Giannone, Robert L. Hettich, Steven D. Brown, Suresh Poudel, Timothy J. Tschaplinski

Splenic Immune Response Is Down-Regulated in C57BL/6J Mice Fed Eicosapentaenoic Acid and Docosahexaenoic Acid Enriched High Fat Diet

Nutrients 2017, 9(1), 50; https://doi.org/10.3390/nu9010050 Nikul K. Soni, Ross AB, Scheers N, Otto I. Savolainen, Intawat Nookaew, Britt G. Gabrielsson, Sandberg Anne Sofie Abstract Dietary n-3 fatty acids eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) are associated with reduction of inflammation, although the mechanisms are poorly understood, especially how the spleen, as a secondary lymphoid […]

Filed Under: Publications Tagged With: Britt G. Gabrielsson, Intawat Nookaew, Nikul K. Soni, Otto I. Savolainen, Ross AB, Sandberg Anne Sofie, Scheers N

PanViz: Interactive Visualization of the Structure of Functionally Annotated Pangenomes

Bioinformatics. 2017 Jan 5. pii: btw761. doi: 10.1093/bioinformatics/btw761. [Epub ahead of print] PubMed PMID: 28057677 Pedersen TL, Nookaew I, Wayne Ussery D, Månsson M. Summary PanViz is a novel, interactive, visualization tool for pangenome analysis. PanViz allows visualization of changes in gene group (groups of similar genes across genomes) classification as different subsets of pangenomes […]

Filed Under: Publications Tagged With: David W. Ussery, Intawat Nookaew, interactive visualization Annotated Pangenomes, Mansson M, Pedersen TL

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