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  1. University of Arkansas for Medical Sciences
  2. College of Medicine
  3. Department of Biomedical Informatics
  4. Se-Ran Jun

Se-Ran Jun

Microcephaly by Zika Virus in Thailand Emerging Infectious Diseases

Thidathip Wongsurawat, Niracha Athipanyasilp, Piroon Jenjaroenpun, Se-Ran Jun, Bualan Kaewnapan, Trudy M. Wassenaar, Nuttawut Leelahakorn, Nasikarn Angkasekwinai, Wannee Kantakamalakul, David W. Ussery, Ruengpung Sutthent, Intawat Nookaew, Navin Horthongkham Abstract We report a confirmed case of congenital Zika virus infection with microcephaly (CZVIM) caused by autochthonous infection at week 9 of pregnancy with Zika virus (ZIKV) […]

Filed Under: Publications Tagged With: Bualan Kaewnapan, David W. Ussery, Intawat Nookaew, Microcephaly, Nasikarn Angkasekwinai, Navin Horthongkham, Niracha Athipanyasilp, Nuttawut Leelahakorn, Piroon Jenjaroenpun, Ruengpung Sutthent, Se-Ran Jun, Thailand, Thidathip Wongsurawat, Trudy M. Wassenaar, Wannee Kantakamalakul, Zika

Genome-Based Comparison of Clostridioides difficile : Average Amino Acid Identity Analysis of Core Genomes

Adriana Cabal, Se-Ran Jun, Piroon Jenjaroenpun, Visanu Wanchai, Intawat Nookaew, Thidathip Wongsurawat, Mary J. Burgess, Atul Kothari, Trudy M. Wassenaar1, David W. Ussery Received: 30 August 2017 /Accepted: 2 February 2018 # The Author(s) 2018. This article is an open access publication Abstract Infections due to Clostridioides difficile (previously known as Clostridium difficile) are a […]

Filed Under: Department News, Publications Tagged With: AAI .MLST, Adriana Cabal, Atul Kothari, C. difficile, Community-acquired infections, Comparative genomics, David W. Ussery, Intawat Nookaew, Mary J. Burgess, Piroon Jenjaroenpun, Se-Ran Jun, Thidathip Wongsurawat, Trudy M. Wassenaar1, Visanu Wanchai

Insights from Comparative Genomics of the Genus Salmonella

Submitted: May 5th 2016 | Reviewed: December 1st 2016 | Published: April 5th 2017 | DOI: 10.5772/67131 Trudy M. Wassenaar, Se-Ran Jun, Visanu Wanchai, Preecha Patumcharoenpol, Intawat Nookaew, Katrina Schlum, Michael R. Leuze and David W. Ussery Abstract Comparative genomics have become a standard approach to gain insights into the inter – relationships of microorganisms. […]

Filed Under: Publications Tagged With: AAI tree, Comparative genomics, core genome, David W. Ussery, Intawat Nookaew, Katrina Schlum, Michael R. Leuze, Preecha Patumcharoenpal, Salmonella, Se-Ran Jun, small RNA, Trudy M. Wassenaar

Viral Phylogenomics Using an Alignment-Free Method: A Three-Step Approach to Determine Optimal Length of k-mer

Sci Rep. 2017 Jan 19;7:40712. doi: 10.1038/srep40712. PubMed PMID: 28102365; PubMed Central PMCID: PMC5244389 Qian Zhang, Se-Ran Jun, Michael Leuze, David Ussery & Intawat Nookaew Abstract The development of rapid, economical genome sequencing has shed new light on the classification of viruses. As of October 2016, the National Center for Biotechnology Information (NCBI) database contained […]

Filed Under: Publications Tagged With: David Ussery, Intawat Nookaew, Michael Leuze, Qian Zhang, Se-Ran Jun, Viral Phylogenomics

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